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Example clinical scenario

A 30-year-old offshore worker is referred to a cardiology clinic after undergoing a routine work medical, during which an electrocardiogram (ECG) shows a QTc interval of 520 ms. He is fit and well and not on any regular medications.

When to consider genomic testing

  • Consider genomic testing if there is a firm clinical diagnosis of long QT syndrome (LQTS) as indicated by either:
    • QTc ≥500 ms in repeated 12-lead ECGs;
    • LQTS risk >3.5;
    • QTc ≥480 ms in repeated 12-lead ECGs and an unexplained syncopal episode; or
    • QTc ≥480 ms in repeated 12-lead ECGs and a history of sudden unexplained death under 60 years of age in a first- or second-degree relative.
  • A secondary cause for QT prolongation should be excluded first. Secondary causes include QT-prolonging medications and electrolyte anomalies, particularly hypokalaemia and hypomagnesaemia.
  • Genomic testing should be carried out in parallel with expert phenotypic assessment – for example, in an inherited cardiac conditions (ICC) clinic – and with support from clinical genetics services. Note that testing may occasionally be appropriate outside these criteria, following discussion in an ICC multidisciplinary team meeting.
  • Referrals for genomic testing will be triaged by a genomic laboratory. Testing should be targeted at those in whom a genetic or genomic diagnosis will guide management for the proband or their family.
  • Testing should also be considered in first-degree relatives of a patient with confirmed LQTS whose condition is associated with an identified familial variant.
  • If the patient fulfils diagnostic criteria as detailed in published guidelines that differ from the eligibility criteria in the National Genomic Test Directory, it is appropriate to refer to an ICC clinic for further assessment.

What do you need to do?

  • Consult the National Genomic Test Directory. From here you can access the rare and inherited disease eligibility criteria for information about individual tests and their associated eligibility criteria. You can also access a spreadsheet containing details of all available tests.
  • To find out which genes are included on different gene panels, see the NHS Genomic Medicine Service (GMS) Signed Off Panels Resource.
  • If the relevant eligibility criteria are met, discuss the case with or refer it to your local ICC clinical service for genomic testing and family screening. You will need to provide details confirming that the patient fulfils the criteria.
  • The relevant clinical indication for long QT syndrome is:
  • For tests that do not include whole genome sequencing, you will need to:
  • These tests are DNA based, and an EDTA sample (purple-topped tube) is required.
  • Information about patient eligibility and test indications was correct at the time of writing. When requesting a test, please refer to the National Genomic Test Directory to confirm the right test for your patient.

Resources

Resources for patients

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  • Last reviewed: 07/03/2024
  • Next review due: 07/03/2025
  • Authors: Dr Bernadette Khodaghalian, Dr Hannah Massey
  • Reviewers: Dr Rachel Bastiaenen, Dr John Deans, Dr Catherine Mercer