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Example clinical scenario

A 10-day-old baby boy presents unwell with poor feeding, vomiting and failure to regain his birth weight. Biochemical investigations reveal hyponatraemia, hyperkalaemia, metabolic acidosis and elevated 17-hydroxyprogesterone (17-OHP).

When to consider genomic testing

Children with suspected congenital adrenal hyperplasia (CAH) need genomic testing to establish the possible genetic cause and, in cases of ambiguous genitalia, their genetic sex. Genomic tests should be conducted in parallel with biochemical investigations.

Consider genomic testing in the following circumstances:

  • neonate with ambiguous genitalia; and
  • biochemically diagnosed CAH with at least one of the following:
    • ambiguous genitalia or virilisation in a female infant at birth;
    • precocious puberty;
    • accelerated pre-pubertal growth with advanced bone age and evidence of adrenal steroid anomaly;
    • salt-losing crisis in the neonatal period; and/or
    • infant electrolyte disturbance.

What do you need to do?

  • Consult the National Genomic Test Directory. From here you can access the rare and inherited disease eligibility criteria, which provides information about individual tests and their associated eligibility criteria. You can also access a spreadsheet containing details of all available tests.
  • To find out which genes are included on different gene panels, see the NHS Genomic Medicine Service (GMS) Signed Off Panels Resource.
  • Decide which of the panels best suits the needs of your patient or family. It may be appropriate to select more than one.
    • For families with a confirmed diagnosis of 21-hydroxylase CAH with no detectable causative variant in CYP21A2 who require linkage testing (a method which attempts to locate the familial disease-causing gene using genetic markers) to guide management or advice, the test to request is:
      • R388 Linkage testing for congenital adrenal hyperplasia.
    • If the underlying diagnosis is still unclear after determination of genetic sex, biochemical investigations and a CAH diagnostic test, the test to request is:
      • parental samples may be needed for interpretation of the child’s (proband’s) result. Parental samples can be taken alongside that of the child, and their DNA stored, or can be requested at a later date if needed.
    • The majority of tests are DNA-based, and an EDTA sample (purple-topped tube) is required. Exceptions include karyotype testing and DNA repair defect testing (for chromosome breakage), which require lithium heparin (green-topped tube).
  • Information about patient eligibility and test indications was correct at the time of writing. When requesting a test, please refer to the National Genomic Test Directory to confirm the right test for your patient.

Resources

For clinicians

References:

For patients

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  • Last reviewed: 15/04/2024
  • Next review due: 15/04/2025
  • Authors: Dr Danielle Bogue
  • Reviewers: Dr Eleanor Hay, Dr Emile Hendriks, Dr Melody Redman