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Example clinical scenario

A 15-year-old girl is referred to paediatric cardiology due to the incidental finding of a murmur. She is generally well and excels at school. An echocardiogram demonstrates asymmetric hypertrophy of the left ventricle. Taking a full family medical history reveals a significant history of sudden death.

When to consider genomic testing

  • Consider genomic testing if the patient is under 18 years old and their left ventricle wall thickness is more than two standard deviations above the predicted population mean (in other words, the z-score, which is defined as the number of standard deviations from the population mean, is above two).
  • Testing should be carried out in parallel with expert phenotypic assessment – for example in an inherited cardiac conditions (ICC) clinic or specialist paediatric cardiology service – and with support from clinical genetics services where appropriate. Note that testing may occasionally be appropriate outside these criteria following discussion at an ICC multidisciplinary team meeting.

What do you need to do?

  • Consult the National Genomic Test Directory. From here you can access the rare and inherited disease eligibility criteria for information about individual tests and their associated eligibility criteria. You can also access a spreadsheet containing details of all available tests.
  • To find out which genes are included on different gene panels, see the NHS Genomic Medicine Service (GMS) Signed Off Panels Resource.
  • If the relevant eligibility criteria are met, discuss the case with or refer it to your local ICC clinical service for genomic testing and family screening. You will need to provide details confirming that the patient fulfils the criteria.
  • If the patient fulfils diagnostic criteria as detailed in published guidelines that differ from the eligibility criteria in the test directory, it is appropriate to refer the case to an ICC clinic for further assessment.
  • For typical non-syndromic cardiomyopathy features, the relevant clinical indication is:
  • For typical syndromic cardiomyopathy features, the relevant clinical indications are as follows.
    • R135 Paediatric or syndromic cardiomyopathy: This indication investigates cases in which cardiomyopathy is a primary presentation (at any age) and there is a second condition, such as dysmorphism, or other feature(s) suggestive of a syndromic cause such as a RASopathy (for example, Noonan syndrome). The panel uses whole genome sequencing (WGS).
    • R240 Diagnostic testing for known mutation(s): This indication should be requested for patients with a family history of cardiomyopathy and a known familial variant, where the patient’s phenotype is in keeping with the familial diagnosis. Consider broader testing if the patient’s phenotype is out of keeping with the family history (for example, there is a significantly earlier onset). The panel involves targeted variant testing.
  • In some patients, a specific disease may be strongly suspected and isolated testing may be appropriate.
  • The majority of genomic tests for ICCs are currently undertaken on a singleton basis, though samples may be needed from additional family members in order to interpret results.
  • For tests that are undertaken using WGS, parental samples should be submitted alongside the patient sample. This is called trio testing. If this is not possible, for example because the child is in care or one or both parents are unavailable for testing, the proband may be tested as a singleton.
  • Clinicians within the ICC service who are requesting testing will need to do the following:
  • The majority of the tests outlined above (including DNA storage) are DNA based, and an EDTA sample (purple-topped tube) is required.
  • Information about patient eligibility and test indications was correct at the time of writing. When requesting a test, please refer to the National Genomic Test Directory to confirm the right test for your patient.

Resources

For clinicians

References:

For patients

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  • Last reviewed: 14/03/2024
  • Next review due: 14/03/2025
  • Authors: Dr Abigail Sharpe
  • Reviewers: Dr Juan Pablo Kaski, Dr Catherine Mercer, Dr Phil Ostrowski, Dr Claire Turner